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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S286_52V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S286_52V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S286_52V6.1Predicted protein (393 aa)    
Predicted Functional Partners:
PP1S224_38V6.1
Predicted protein (991 aa)
     
 
  0.943
Mcb1
Multiubiquitin chain-binding protein (414 aa)
     
 
  0.942
PP1S337_39V6.2
Predicted protein (723 aa)
     
 
  0.940
PP1S12_235V6.1
annotation not available (992 aa)
       
 
  0.938
PP1S414_22V6.1
Predicted protein (903 aa)
     
 
  0.931
PP1S3_553V6.1
Predicted protein (899 aa)
     
 
  0.931
PP1S446_8V6.1
annotation not available (373 aa)
     
 
  0.926
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
     
 
  0.914
PP1S26_199V6.1
annotation not available (424 aa)
     
 
  0.913
PP1S201_10V6.1
annotation not available (417 aa)
     
 
  0.913
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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