STRINGSTRING
PP1S28_382V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S28_382V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S28_382V6.1Predicted protein (96 aa)    
Predicted Functional Partners:
PP1S9_445V6.1
Annotation not available (767 aa)
     
 
  0.949
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
       
 
  0.884
SWDB1501
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
       
 
  0.884
PP1S88_100V6.1
Predicted protein (159 aa)
       
 
  0.784
PP1S36_103V6.1
Predicted protein (570 aa)
       
 
  0.784
PP1S51_110V6.1
Predicted protein (643 aa)
     
  0.764
PP1S281_57V6.1
Predicted protein; Binds the poly(A) tail of mRNA (647 aa)
     
  0.764
PP1S257_72V6.1
Predicted protein; Binds the poly(A) tail of mRNA (650 aa)
     
  0.764
PP1S126_131V6.1
Predicted protein; Binds the poly(A) tail of mRNA (645 aa)
     
  0.764
RS27
Predicted protein (233 aa)
       
 
  0.723
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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