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STRINGSTRING
PP1S290_44V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S290_44V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S290_44V6.1Predicted protein; Belongs to the universal ribosomal protein uS9 family (144 aa)    
Predicted Functional Partners:
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
   
 
  0.992
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
   
 
  0.992
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
 
  0.992
PP1S77_207V6.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (392 aa)
   
 
  0.991
PP1S330_36V6.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (392 aa)
   
 
  0.991
PP1S154_134V6.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (392 aa)
   
 
  0.991
PP1S154_131V6.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (392 aa)
   
 
  0.991
PP1S79_58V6.1
Predicted protein; Belongs to the universal ribosomal protein uS17 family (160 aa)
   
 
  0.991
PP1S51_307V6.1
Predicted protein; Belongs to the universal ribosomal protein uS17 family (160 aa)
   
 
  0.991
PP1S30_89V6.1
Predicted protein (160 aa)
   
 
  0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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