STRINGSTRING
PP1S291_39V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S291_39V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S291_39V6.1Predicted protein (307 aa)    
Predicted Functional Partners:
PP1S10125_1V6.1
Predicted protein (344 aa)
  0.992
PP1S450_21V6.3
Delta-aminolevulinic acid dehydratase (431 aa)
 
  0.956
HEMB
Delta-aminolevulinic acid dehydratase, chloroplastic; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity) (454 aa)
 
  0.956
PP1S5_369V6.1
Uroporphyrinogen decarboxylase (430 aa)
 
 
  0.890
PP1S58_172V6.1
Predicted protein (452 aa)
 
  0.889
PP1S114_123V6.2
Uroporphyrinogen decarboxylase (410 aa)
 
 
  0.889
PP1S3_96V6.2
Predicted protein (411 aa)
 
 
  0.888
PP1S15_292V6.1
Predicted protein (484 aa)
 
   
  0.859
PP1S54_66V6.2
Predicted protein (485 aa)
 
   
  0.858
PP1S13_20V6.1
Glutamyl-tRNA reductase (542 aa)
 
   
  0.838
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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