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STRINGSTRING
PP1S297_17V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S297_17V6.1" - Peptidyl-prolyl cis-trans isomerase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S297_17V6.1Peptidyl-prolyl cis-trans isomerase (270 aa)    
Predicted Functional Partners:
PP1S35_207V6.1
annotation not available (267 aa)
     
      0.946
PP1S198_53V6.1
Predicted protein (269 aa)
     
      0.946
PP1S198_54V6.1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (358 aa)
     
 
  0.924
PP1S188_71V6.1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (115 aa)
     
 
  0.924
PP1S201_92V6.1
Predicted protein (527 aa)
     
 
  0.911
PP1S18_81V6.1
annotation not available (920 aa)
     
      0.911
PP1S158_107V6.1
annotation not available (1339 aa)
     
      0.907
PP1S4_450V6.1
Predicted protein (207 aa)
     
      0.902
PP1S256_35V6.1
Predicted protein (337 aa)
     
      0.902
PP1S13_19V6.1
Predicted protein (337 aa)
     
      0.902
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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