STRINGSTRING
PP1S297_20V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S297_20V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S297_20V6.1Predicted protein (477 aa)    
Predicted Functional Partners:
PP1S77_317V6.1
Predicted protein (360 aa)
   
        0.757
PP1S23_324V6.1
Predicted protein (366 aa)
   
        0.757
PP1S86_212V6.1
Predicted protein (172 aa)
   
        0.512
PP1S20_335V6.1
Predicted protein (147 aa)
   
        0.512
PP1S13_380V6.1
Predicted protein (105 aa)
   
        0.512
PP1S31_76V6.1
Predicted protein (68 aa)
           
  0.506
PP1S136_187V6.2
Annotation not available (85 aa)
           
  0.506
PP1S8_196V6.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (272 aa)
           
  0.499
PP1S44_320V6.1
Annotation not available (273 aa)
           
  0.499
PP1S10_175V6.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (276 aa)
           
  0.499
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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