STRINGSTRING
GLP6 protein (Physcomitrella patens) - STRING interaction network
GLP6 GID1-like protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLP6GLP6 GID1-like protein (347 aa)    
Predicted Functional Partners:
PP1S11432_1V6.1
Predicted protein (146 aa)
     
      0.807
PP1S300_8V6.1
Predicted protein (152 aa)
       
      0.764
PP1S3133_1V6.1
Predicted protein (342 aa)
   
   
  0.550
PP1S212_67V6.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (186 aa)
       
      0.543
GAL2
DELLA proteinDELLA-like protein (595 aa)
       
 
  0.534
GAL1
DELLA proteinDELLA-like protein (712 aa)
       
 
  0.534
PP1S249_66V6.1
Predicted protein (152 aa)
       
      0.510
PP1S38_234V6.1
Annotation not available (103 aa)
   
          0.507
PP1S274_69V6.1
Urease (837 aa)
           
  0.503
PP1S370_61V6.1
Predicted protein (670 aa)
           
  0.480
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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