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STRINGSTRING
PP1S29_146V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S29_146V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S29_146V6.1Predicted protein (397 aa)    
Predicted Functional Partners:
PP1S194_46V6.1
Predicted protein (372 aa)
   
 
  0.963
PP1S60_199V6.2
Predicted protein (491 aa)
       
  0.947
PP1S107_76V6.1
Predicted protein (433 aa)
       
  0.947
PP1S291_53V6.1
Predicted protein (401 aa)
         
 
0.800
PP1S246_97V6.1
Predicted protein (339 aa)
         
 
0.800
PP1S95_67V6.1
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine; Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily (434 aa)
     
 
  0.703
PP1S223_42V6.1
Predicted protein (259 aa)
   
   
  0.684
PP1S138_31V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (534 aa)
       
 
  0.668
PP1S130_213V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (534 aa)
       
 
  0.668
PP1S190_71V6.1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (234 aa)
   
   
  0.664
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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