STRINGSTRING
PP1S29_309V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S29_309V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S29_309V6.1Predicted protein (736 aa)    
Predicted Functional Partners:
PP1S9_445V6.1
Annotation not available (767 aa)
     
  0.999
PP1S61_42V6.1
Predicted protein (1457 aa)
     
  0.999
PP1S197_75V6.1
Predicted protein (677 aa)
     
  0.999
PP1S17_107V6.1
Predicted protein (433 aa)
     
  0.999
PP1S116_47V6.1
Annotation not available (787 aa)
     
 
0.999
PP1S77_275V6.1
Predicted protein (682 aa)
     
0.997
PP1S23_196V6.1
Predicted protein (682 aa)
     
0.997
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
     
  0.991
SWDB1501
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
     
  0.991
PP1S49_189V6.1
Predicted protein (193 aa)
     
  0.990
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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