STRINGSTRING
PP1S2_161V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S2_161V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S2_161V6.1Predicted protein (670 aa)    
Predicted Functional Partners:
PP1S212_86V6.1
Predicted protein (160 aa)
       
      0.636
PP1S101_152V6.1
Predicted protein (160 aa)
       
      0.636
NTMC2T4.1
Integral membrane single C2 domain protein (511 aa)
     
   
  0.435
NTMC2T4.3
Integral membrane single C2 domain protein (485 aa)
     
   
  0.435
NTMC2T4.2
Integral membrane single C2 domain protein (510 aa)
     
   
  0.435
PP1S84_51V6.1
Predicted protein (446 aa)
       
      0.431
PP1S78_20V6.1
Predicted protein (674 aa)
       
      0.431
PP1S6_131V6.1
Predicted protein (413 aa)
       
      0.431
PP1S65_156V6.1
Annotation not available (571 aa)
       
      0.431
PP1S62_224V6.1
Annotation not available (499 aa)
       
      0.431
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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