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STRINGSTRING
PP1S2_309V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S2_309V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S2_309V6.1Predicted protein (1017 aa)    
Predicted Functional Partners:
PP1S130_293V6.1
Predicted protein (435 aa)
           
  0.612
PP1S72_333V6.1
Predicted protein (618 aa)
           
  0.610
PP1S14_212V6.1
annotation not available (612 aa)
           
  0.610
PP1S25_197V6.2
Predicted protein (131 aa)
           
  0.527
PP1S38_60V6.1
Predicted protein (646 aa)
           
  0.522
PP1S174_72V6.1
Predicted protein (610 aa)
           
  0.522
PP1S130_12V6.1
annotation not available (524 aa)
     
 
  0.517
PP1S74_193V6.2
60S ribosomal protein L18a (181 aa)
       
 
  0.508
PP1S5_178V6.1
60S ribosomal protein L18a ; Belongs to the eukaryotic ribosomal protein eL20 family (177 aa)
       
 
  0.508
PP1S56_243V6.2
60S ribosomal protein L18a ; Belongs to the eukaryotic ribosomal protein eL20 family (177 aa)
       
 
  0.508
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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