• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S2_70V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S2_70V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S2_70V6.1annotation not available (225 aa)    
Predicted Functional Partners:
PP1S62_228V6.1
annotation not available (250 aa)
     
        0.783
PP1S59_305V6.1
annotation not available (823 aa)
     
        0.783
PP1S324_39V6.1
annotation not available (761 aa)
     
        0.783
PP1S114_181V6.1
annotation not available (980 aa)
     
        0.783
PP1S66_284V6.1
Predicted protein (580 aa)
         
  0.637
PP1S345_41V6.1
50S ribosomal protein L35 ; Belongs to the bacterial ribosomal protein bL35 family (126 aa)
         
  0.612
PP1S324_20V6.1
50S ribosomal protein L35 ; Belongs to the bacterial ribosomal protein bL35 family (126 aa)
         
  0.612
PP1S80_92V6.1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family (339 aa)
         
  0.605
PP1S446_1V6.1
Predicted protein (307 aa)
     
        0.600
PP1S333_60V6.2
Predicted protein (307 aa)
     
        0.600
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]