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STRINGSTRING
PP1S300_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S300_57V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S300_57V6.1Predicted protein (699 aa)    
Predicted Functional Partners:
PP1S134_37V6.1
annotation not available (1469 aa)
     
 
  0.942
PP1S46_194V6.2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
 
  0.934
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
 
  0.934
PP1S98_20V6.1
annotation not available (648 aa)
     
 
  0.860
PP1S49_109V6.1
Predicted protein (599 aa)
     
 
  0.771
PP1S257_1V6.1
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (479 aa)
     
 
  0.754
PP1S222_133V6.1
annotation not available (863 aa)
     
 
  0.754
PP1S192_40V6.1
annotation not available (885 aa)
     
 
  0.754
PP1S21_400V6.1
annotation not available (1225 aa)
     
 
  0.747
PP1S15_297V6.1
annotation not available (658 aa)
   
 
  0.747
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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