STRINGSTRING
PP1S300_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S300_57V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S300_57V6.1Predicted protein (699 aa)    
Predicted Functional Partners:
PP1S3363_1V6.1
Predicted protein (540 aa)
   
  0.986
PP1S134_37V6.1
Predicted protein (1469 aa)
     
 
  0.950
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
 
  0.861
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
 
  0.861
PP1S31_236V6.1
Rad51A protein (342 aa)
 
 
  0.848
PP1S42_140V6.1
Rad51B protein (342 aa)
 
 
  0.845
PP1S98_157V6.2
RecA (435 aa)
   
 
  0.804
PP1S412_17V6.1
RecA (460 aa)
   
 
  0.804
PP1S137_214V6.1
Annotation not available (325 aa)
   
 
  0.804
PP1S129_197V6.1
Annotation not available (449 aa)
   
 
  0.804
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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