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STRINGSTRING
PP1S300_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S300_8V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S300_8V6.1Predicted protein (152 aa)    
Predicted Functional Partners:
PP1S249_66V6.1
Predicted protein (152 aa)
     
 
  0.999
PP1S212_67V6.1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (186 aa)
     
 
  0.999
PP1S162_95V6.3
Predicted protein (130 aa)
     
 
  0.999
PP1S341_64V6.1
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (126 aa)
     
 
  0.994
PP1S18_174V6.1
annotation not available (124 aa)
     
 
  0.991
PP1S10_5V6.1
Predicted protein (139 aa)
     
 
  0.991
PP1S85_9V6.1
Predicted protein (150 aa)
     
   
  0.951
PP1S142_56V6.2
annotation not available (435 aa)
           
  0.951
PP1S84_179V6.1
Predicted protein (87 aa)
     
        0.885
PP1S7_46V6.1
Uncharacterized protein (117 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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