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STRINGSTRING
PP1S304_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S304_15V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S304_15V6.1Predicted protein (229 aa)    
Predicted Functional Partners:
PP1S20_112V6.1
annotation not available (387 aa)
           
  0.773
PP1S382_38V6.1
Predicted protein (443 aa)
           
  0.690
PP1S156_74V6.1
annotation not available (373 aa)
           
  0.688
PP1S204_101V6.1
annotation not available (1507 aa)
           
  0.687
PP1S142_33V6.1
Predicted protein (1037 aa)
           
  0.675
PP1S319_37V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (436 aa)
           
  0.628
PP1S53_206V6.2
Exopolyphosphatase (761 aa)
           
  0.575
PP1S41_155V6.3
Predicted protein (680 aa)
           
  0.575
PP1S276_100V6.1
Predicted protein (618 aa)
           
  0.575
PP1S213_25V6.1
Predicted protein (318 aa)
           
  0.574
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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