• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S304_37V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S304_37V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S304_37V6.1Predicted protein (698 aa)    
Predicted Functional Partners:
PP1S34_164V6.1
Predicted protein (153 aa)
   
 
  0.980
PP1S55_196V6.1
Amidophosphoribosyltransferase (623 aa)
   
 
  0.968
PP1S43_32V6.1
Predicted protein (1238 aa)
   
  0.964
PP1S42_59V6.2
Predicted protein (468 aa)
   
  0.964
PP1S343_21V6.1
Predicted protein (1239 aa)
   
  0.964
PP1S11_3V6.1
Predicted protein (467 aa)
   
  0.964
PP1S195_48V6.2
Mannose-6-phosphate isomerase ; Belongs to the mannose-6-phosphate isomerase type 1 family (430 aa)
   
 
  0.963
PP1S15_422V6.2
Mannose-6-phosphate isomerase ; Belongs to the mannose-6-phosphate isomerase type 1 family (427 aa)
   
 
  0.963
PP1S93_131V6.1
Predicted protein (2251 aa)
   
 
  0.958
PP1S81_196V6.1
Predicted protein (2214 aa)
   
 
  0.958
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]