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PP1S306_37V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S306_37V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S306_37V6.1Predicted protein; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (332 aa)    
Predicted Functional Partners:
PP1S84_209V6.1
Predicted protein (356 aa)
         
    0.900
PP1S163_63V6.1
Predicted protein (362 aa)
         
    0.900
PP1S126_185V6.1
Predicted protein (347 aa)
         
    0.900
PP1S30_260V6.2
4-hydroxyphenylpyruvate dioxygenase (432 aa)
           
  0.407
PP1S21_161V6.1
4-hydroxyphenylpyruvate dioxygenase (433 aa)
           
  0.407
PP1S207_68V6.1
Predicted protein (467 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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