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ARP1504 protein (Physcomitrella patens) - STRING interaction network
"ARP1504" - Actin-related protein Arp5 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARP1504Actin-related protein Arp5 ; Belongs to the actin family (731 aa)    
Predicted Functional Partners:
ARP1502
annotation not available (614 aa)
     
 
  0.988
PP1S505_21V6.1
Predicted protein (160 aa)
       
 
  0.974
RUVBL1502
Predicted protein (1320 aa)
     
 
  0.952
PP1S69_68V6.2
annotation not available (587 aa)
     
 
  0.944
PP1S68_173V6.1
annotation not available (1142 aa)
     
 
  0.944
RUVBL1503
DNA helicase, TBP-interacting protein ; Belongs to the RuvB family (468 aa)
     
 
  0.928
CHR1523
annotation not available (1663 aa)
     
 
  0.927
PP1S304_7V6.1
annotation not available (1197 aa)
     
 
  0.927
RUVBL1501
DNA helicase, TBP-interacting protein ; Belongs to the RuvB family (456 aa)
     
 
  0.912
PP1S40_80V6.1
annotation not available (146 aa)
     
 
  0.912
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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