• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S309_58V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S309_58V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S309_58V6.1Predicted protein; Belongs to the protein kinase superfamily (1173 aa)    
Predicted Functional Partners:
PP1S219_74V6.1
Predicted protein (205 aa)
     
 
  0.995
PP1S274_72V6.1
Predicted protein (903 aa)
     
 
  0.993
PP1S166_43V6.1
Predicted protein (1280 aa)
     
 
  0.993
PP1S61_325V6.1
annotation not available (376 aa)
     
 
  0.990
PP1S42_51V6.1
Predicted protein (590 aa)
     
 
  0.990
PP1S7_399V6.1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (93 aa)
     
 
  0.985
PP1S36_271V6.1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (91 aa)
     
 
  0.985
PP1S183_85V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
0.981
PP1S163_27V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
0.981
PP1S96_202V6.1
Predicted protein (746 aa)
     
 
  0.979
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (17%) [HD]