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STRINGSTRING
PP1S30_174V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S30_174V6.2" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S30_174V6.2Uncharacterized protein (304 aa)    
Predicted Functional Partners:
PP1S79_94V6.1
Predicted protein (396 aa)
     
      0.854
PP1S56_240V6.1
Predicted protein (435 aa)
     
      0.827
PP1S64_78V6.1
Predicted protein (733 aa)
     
        0.819
PP1S62_201V6.2
annotation not available (942 aa)
     
        0.819
PP1S54_189V6.1
Predicted protein (775 aa)
     
        0.819
PP1S36_254V6.2
Predicted protein (822 aa)
     
        0.819
PP1S25_63V6.1
Predicted protein (770 aa)
     
        0.819
PP1S200_23V6.1
annotation not available (983 aa)
     
        0.819
PP1S15_181V6.1
Predicted protein (792 aa)
     
        0.819
PP1S142_79V6.1
Predicted protein (1079 aa)
     
        0.819
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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