STRINGSTRING
PP1S30_220V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S30_220V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S30_220V6.1Annotation not available (590 aa)    
Predicted Functional Partners:
PP1S9_40V6.1
Plastid division site determinant MinE (257 aa)
           
  0.495
PP1S49_40V6.1
Predicted protein (260 aa)
           
  0.495
PP1S266_15V6.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (475 aa)
     
   
  0.452
TUBG1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly (475 aa)
     
   
  0.452
ftsZ2-2
FtsZ2-2 plastid division protein (464 aa)
           
  0.407
ftsZ2-1
FtsZ2-1 plastid division protein (458 aa)
           
  0.407
PP1S35_285V6.1
Predicted protein (346 aa)
           
  0.407
PP1S267_72V6.1
Predicted protein (720 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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