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STRINGSTRING
PP1S30_33V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S30_33V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S30_33V6.1Uncharacterized protein (363 aa)    
Predicted Functional Partners:
PP1S156_164V6.1
annotation not available (583 aa)
           
  0.789
PP1S302_56V6.1
annotation not available (1177 aa)
     
   
  0.780
PP1S213_95V6.1
annotation not available (308 aa)
           
  0.656
PP1S80_86V6.1
annotation not available (1035 aa)
           
  0.624
PP1S153_170V6.1
annotation not available (1032 aa)
           
  0.624
PP1S123_7V6.1
Predicted protein; Belongs to the sterol desaturase family (333 aa)
         
  0.615
PP1S215_90V6.1
Predicted protein (530 aa)
           
  0.606
PP1S199_153V6.1
Predicted protein (830 aa)
           
  0.606
PP1S7_498V6.1
annotation not available (153 aa)
           
  0.604
PP1S36_353V6.2
Predicted protein (165 aa)
           
  0.604
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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