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cslD6 protein (Physcomitrella patens) - STRING interaction network
"cslD6" - Cellulose synthase-like D6, glycosyltransferase family 2 protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cslD6Cellulose synthase-like D6, glycosyltransferase family 2 protein (1165 aa)    
Predicted Functional Partners:
PP1S2_200V6.1
Annotation not available (372 aa)
   
   
  0.814
PP1S33_203V6.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1397 aa)
   
   
  0.533
PP1S109_208V6.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1464 aa)
   
   
  0.533
PP1S1141_3V6.1
Annotation not available (110 aa)
         
  0.531
PP1S513_5V6.1
Predicted protein (737 aa)
   
  0.529
PP1S157_83V6.1
Predicted protein (711 aa)
   
  0.529
PP1S143_9V6.1
Predicted protein (991 aa)
   
  0.529
PP1S118_105V6.1
Predicted protein (990 aa)
   
  0.529
PP1S225_31V6.1
Predicted protein (1132 aa)
   
  0.528
PP1S136_74V6.1
Annotation not available (1098 aa)
   
  0.528
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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