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STRINGSTRING
cslD6 protein (Physcomitrella patens) - STRING interaction network
"cslD6" - Cellulose synthase-like D6, glycosyltransferase family 2 protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cslD6Cellulose synthase-like D6, glycosyltransferase family 2 protein (1165 aa)    
Predicted Functional Partners:
cslA1
Cellulose synthase-like A1, glycosyltransferase family 2 protein; mannan synthase (538 aa)
           
  0.899
cslA2
Cellulose synthase-like A2, glycosyltransferase family 2 protein; mannan synthase (538 aa)
           
  0.680
PP1S362_10V6.1
Predicted protein (186 aa)
           
  0.521
PP1S2_200V6.1
annotation not available (372 aa)
   
   
  0.460
PP1S310_3V6.1
annotation not available (653 aa)
           
  0.429
PP1S3_192V6.1
Predicted protein (179 aa)
           
  0.422
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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