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STRINGSTRING
pphn39k21 protein (Physcomitrella patens) - STRING interaction network
"pphn39k21" - Protein phosphatase 2C in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pphn39k21Protein phosphatase 2C (291 aa)    
Predicted Functional Partners:
PP1S5_197V6.1
Phenylalanine ammonia-lyase (728 aa)
           
  0.680
PP1S52_44V6.1
Phenylalanine ammonia-lyase (738 aa)
           
  0.680
PP1S500_4V6.1
Phenylalanine ammonia-lyase (738 aa)
           
  0.680
PP1S494_3V6.1
Phenylalanine ammonia-lyase (703 aa)
           
  0.680
PP1S43_88V6.1
Phenylalanine ammonia-lyase (740 aa)
           
  0.680
PP1S43_79V6.1
Phenylalanine ammonia-lyase (740 aa)
           
  0.680
PP1S43_67V6.1
Phenylalanine ammonia-lyase (740 aa)
           
  0.680
PP1S36_253V6.1
Phenylalanine ammonia-lyase (758 aa)
           
  0.680
PP1S32_311V6.1
Phenylalanine ammonia-lyase (738 aa)
           
  0.680
PP1S22_3V6.1
Phenylalanine ammonia-lyase (738 aa)
           
  0.680
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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