STRINGSTRING
Glk1 protein (Physcomitrella patens) - STRING interaction network
"Glk1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glk1Predicted protein (511 aa)    
Predicted Functional Partners:
PP1S225_73V6.1
Predicted protein (601 aa)
     
   
  0.539
PP1S340_26V6.1
Predicted protein (258 aa)
     
   
  0.468
PP1S113_88V6.1
Predicted protein (252 aa)
     
   
  0.468
PP1S307_58V6.1
Predicted protein (871 aa)
           
  0.465
PP1S116_71V6.1
Predicted protein (871 aa)
           
  0.465
PP1S7_296V6.1
Annotation not available (568 aa)
     
   
  0.408
PpSig2
Plastid sigma facor SIG2 (579 aa)
     
   
  0.408
PP1S28_86V6.1
Predicted protein (441 aa)
     
   
  0.408
PP1S28_82V6.1
Predicted protein (589 aa)
     
   
  0.408
CHLH1
CHLH2 like Mg protoporphyrin IX chelatase subunit H protein (1420 aa)
     
   
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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