• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S312_48V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S312_48V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S312_48V6.1annotation not available (390 aa)    
Predicted Functional Partners:
PP1S74_120V6.1
Predicted protein (2186 aa)
           
  0.589
PP1S94_4V6.1
annotation not available (238 aa)
     
   
  0.585
PP1S62_139V6.1
annotation not available (420 aa)
     
   
  0.585
PP1S79_266V6.2
Predicted protein (485 aa)
           
  0.553
PP1S67_54V6.1
annotation not available (379 aa)
           
  0.553
PP1S114_10V6.1
Predicted protein (260 aa)
           
  0.549
HPL1
Hydroperoxide lyase (532 aa)
     
   
  0.537
PP1S74_26V6.2
Predicted protein (317 aa)
           
  0.529
PP1S159_20V6.1
Predicted protein (644 aa)
     
   
  0.516
PP1S209_135V6.1
Acyl-coenzyme A oxidase ; Belongs to the acyl-CoA oxidase family (667 aa)
           
  0.514
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]