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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S312_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S312_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S312_50V6.1Predicted protein (566 aa)    
Predicted Functional Partners:
PP1S286_33V6.1
Predicted protein (322 aa)
           
  0.916
PP1S1_778V6.1
Uncharacterized protein (810 aa)
     
 
  0.826
PP1S4_483V6.1
Predicted protein (425 aa)
     
      0.824
Mcb1
Multiubiquitin chain-binding protein (414 aa)
       
 
  0.799
PP1S26_199V6.1
annotation not available (424 aa)
           
  0.779
PP1S201_10V6.1
annotation not available (417 aa)
           
  0.779
PP1S42_258V6.1
Predicted protein (397 aa)
           
  0.754
PP1S97_169V6.1
Uncharacterized protein (642 aa)
           
  0.664
PP1S262_28V6.1
Predicted protein (643 aa)
           
  0.664
PP1S70_281V6.1
Predicted protein (549 aa)
       
 
  0.631
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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