STRINGSTRING
PP1S312_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S312_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S312_50V6.1Predicted protein (566 aa)    
Predicted Functional Partners:
MKN6
KNOX class 2 protein MKN6 (518 aa)
       
      0.643
PP1S52_231V6.1
Predicted protein (714 aa)
       
      0.643
MKN2
KNOX class 1 protein MKN2 (445 aa)
       
      0.643
PP1S258_6V6.1
Predicted protein (1060 aa)
       
      0.643
MKN5
KNOX class 1 protein MKN5 (508 aa)
       
      0.643
PP1S220_67V6.1
Predicted protein (1009 aa)
       
      0.643
MKN1-3
KNOX class 2 protein MKN1-3 (636 aa)
       
      0.643
PP1S115_128V6.1
Predicted protein (584 aa)
       
      0.643
PP1S72_57V6.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
           
  0.407
PP1S286_33V6.1
Annotation not available (322 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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