STRINGSTRING
PP1S3133_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3133_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3133_1V6.1Predicted protein (342 aa)    
Predicted Functional Partners:
PP1S88_62V6.1
Predicted protein (930 aa)
   
  0.983
PP1S194_198V6.1
Predicted protein (924 aa)
   
  0.983
PP1S169_77V6.1
Annotation not available (652 aa)
   
  0.983
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.979
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
  0.979
PP1S93_131V6.1
Predicted protein (2251 aa)
   
  0.978
PP1S81_196V6.1
Predicted protein (2214 aa)
   
  0.978
PP1S79_140V6.1
Predicted protein (2213 aa)
   
  0.978
PP1S58_117V6.1
Predicted protein (2210 aa)
   
  0.978
PP1S225_68V6.1
Predicted protein (992 aa)
   
  0.972
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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