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STRINGSTRING
PP1S315_9V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S315_9V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S315_9V6.3Predicted protein (231 aa)    
Predicted Functional Partners:
PP1S25_89V6.1
Predicted protein (177 aa)
     
 
  0.975
PP1S83_179V6.2
Predicted protein (218 aa)
     
 
  0.969
PP1S302_35V6.6
Predicted protein (218 aa)
     
 
  0.969
PP1S217_34V6.1
Predicted protein (161 aa)
     
 
  0.935
PP1S42_174V6.1
Predicted protein (311 aa)
     
 
  0.924
PP1S31_299V6.1
annotation not available (276 aa)
     
 
  0.924
PP1S25_10V6.1
annotation not available (190 aa)
     
 
  0.924
PP1S462_7V6.1
Predicted protein (218 aa)
     
 
  0.905
PP1S148_126V6.1
Predicted protein (196 aa)
     
 
  0.905
PP1S127_26V6.1
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication (523 aa)
     
 
  0.824
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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