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STRINGSTRING
PP1S317_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S317_13V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S317_13V6.1annotation not available (680 aa)    
Predicted Functional Partners:
PP1S184_72V6.1
Predicted protein (828 aa)
   
 
  0.972
PP1S199_89V6.1
annotation not available (1133 aa)
     
 
  0.950
PP1S15_233V6.1
tRNA (guanine(26)-N(2))-dimethyltransferase (715 aa)
     
   
  0.942
PP1S12_309V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family (495 aa)
     
   
  0.942
HAG1502
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (569 aa)
   
   
  0.908
PP1S167_46V6.1
annotation not available (552 aa)
   
   
  0.908
PP1S28_25V6.1
Uncharacterized protein; Belongs to the DEAD box helicase family (452 aa)
   
   
  0.899
PP1S20_121V6.1
annotation not available (436 aa)
   
        0.898
PP1S100_108V6.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (520 aa)
   
        0.898
PP1S132_180V6.1
Predicted protein (365 aa)
       
 
  0.895
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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