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STRINGSTRING
PP1S31_108V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_108V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_108V6.2Predicted protein (415 aa)    
Predicted Functional Partners:
PP1S9_51V6.2
annotation not available (477 aa)
   
 
  0.979
PP1S130_227V6.1
Predicted protein (485 aa)
   
 
  0.979
PP1S47_21V6.1
Predicted protein (358 aa)
   
 
  0.968
PP1S13_392V6.1
Predicted protein (368 aa)
   
 
  0.968
PP1S30_260V6.2
4-hydroxyphenylpyruvate dioxygenase (432 aa)
       
  0.967
PP1S21_161V6.1
4-hydroxyphenylpyruvate dioxygenase (433 aa)
       
  0.967
PP1S66_138V6.1
Predicted protein (415 aa)
   
   
0.923
PP1S425_20V6.2
Predicted protein (524 aa)
   
 
  0.921
PP1S20_284V6.1
Predicted protein (522 aa)
   
 
  0.921
PP1S100_107V6.1
Predicted protein (518 aa)
   
 
  0.921
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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