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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S31_128V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_128V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_128V6.1Predicted protein (198 aa)    
Predicted Functional Partners:
PP1S30_345V6.1
Uncharacterized protein (282 aa)
     
 
  0.932
PP1S257_45V6.1
annotation not available (138 aa)
     
 
  0.932
PP1S1139_3V6.1
Predicted protein (137 aa)
     
 
  0.932
PP1S62_34V6.1
annotation not available (410 aa)
     
 
  0.830
PP1S44_238V6.1
annotation not available (476 aa)
     
 
  0.830
PP1S145_173V6.1
Predicted protein (388 aa)
     
 
  0.830
Per1
Uncharacterized protein (221 aa)
     
 
  0.790
PP1S40_134V6.1
Predicted protein (222 aa)
     
 
  0.788
PP1S32_349V6.1
Predicted protein (222 aa)
     
 
  0.788
PP1S185_2V6.1
Predicted protein (142 aa)
   
   
  0.776
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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