STRINGSTRING
PP1S31_201V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_201V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_201V6.1Annotation not available (688 aa)    
Predicted Functional Partners:
CPD1502
Chromosome condensation complex protein (1623 aa)
     
  0.997
CPD1501
Chromosome condensation complex protein (1668 aa)
     
  0.997
CPC1504
Condensin complex component SMC2 (1196 aa)
     
  0.997
CPC1501
Condensin complex component SMC4 (1258 aa)
     
  0.997
PP1S71_267V6.1
Annotation not available (1107 aa)
     
  0.996
PP1S71_266V6.1
Annotation not available (207 aa)
     
  0.996
CPC1502
Condensin complex component SMC1 (1209 aa)
     
  0.971
CPC1505
Condensin complex component SMC3 (1171 aa)
     
  0.970
PP1S122_44V6.1
Annotation not available (103 aa)
     
  0.970
PP1S274_85V6.1
Predicted protein (1062 aa)
     
  0.969
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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