STRINGSTRING
PP1S31_24V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_24V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_24V6.1Predicted protein (1688 aa)    
Predicted Functional Partners:
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.984
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
     
  0.984
PP1S15_297V6.1
Annotation not available (658 aa)
     
  0.974
PP1S2991_1V6.1
Predicted protein (270 aa)
   
  0.973
PP1S177_124V6.1
Predicted protein (734 aa)
   
  0.973
PP1S251_77V6.1
Predicted protein; Component of the post-replicative DNA mismatch repair system (MMR) (951 aa)
   
  0.972
PP1S16_395V6.1
Annotation not available (276 aa)
   
  0.972
PP1S225_68V6.1
Predicted protein (992 aa)
   
  0.971
PP1S98_157V6.2
RecA (435 aa)
   
  0.964
PP1S42_140V6.1
Rad51B protein (342 aa)
   
  0.964
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (16%) [HD]