STRINGSTRING
PP1S31_351V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_351V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_351V6.1Annotation not available (997 aa)    
Predicted Functional Partners:
PP1S1_420V6.1
Predicted protein (541 aa)
     
  0.983
PP1S270_56V6.1
Predicted protein (177 aa)
       
  0.977
PP1S20_386V6.1
Predicted protein (190 aa)
       
  0.977
PP1S93_68V6.1
Predicted protein (422 aa)
       
  0.977
PP1S79_74V6.1
Predicted protein (324 aa)
       
  0.977
PP1S460_26V6.1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1820 aa)
     
  0.974
PP1S249_64V6.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1820 aa)
     
  0.974
PP1S96_1V6.1
Predicted protein (364 aa)
     
  0.973
PP1S83_67V6.1
Annotation not available (1509 aa)
     
  0.973
PP1S83_186V6.1
Annotation not available (2012 aa)
     
  0.973
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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