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PpMET1 protein (Physcomitrella patens) - STRING interaction network
"PpMET1" - Cytosine-specific methyltransferase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpMET1Cytosine-specific methyltransferase (1565 aa)    
Predicted Functional Partners:
SDG1518
Histone methyltransferase Su3-9 group (591 aa)
   
  0.981
SDG1520
Predicted protein (718 aa)
   
  0.981
SDG1519
Histone methyltransferase Su3-9 group (757 aa)
   
  0.981
HDA1504
Histone deacetylase (723 aa)
       
  0.950
HDA1505
Predicted protein (774 aa)
       
  0.950
HDA1506
Histone deacetylase (431 aa)
       
  0.950
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
 
  0.937
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
 
  0.937
PP1S100_146V6.1
Polycomb group protein (999 aa)
     
  0.910
PP1S244_74V6.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (392 aa)
       
  0.909
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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