STRINGSTRING
PP1S31_5V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_5V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_5V6.1Annotation not available (322 aa)    
Predicted Functional Partners:
PP1S99_131V6.1
Annotation not available (79 aa)
   
 
  0.850
PP1S72_25V6.1
Predicted protein (751 aa)
   
 
  0.850
PP1S213_103V6.1
Predicted protein (831 aa)
   
 
  0.850
PP1S120_164V6.1
Predicted protein (748 aa)
   
 
  0.850
PP1S120_127V6.1
Predicted protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (748 aa)
   
 
  0.850
PP1S60_266V6.1
Predicted protein (666 aa)
     
   
  0.846
PP1S1_815V6.1
Predicted protein (664 aa)
     
   
  0.846
PP1S159_52V6.1
Predicted protein (664 aa)
     
   
  0.846
PP1S133_10V6.1
Predicted protein (668 aa)
     
   
  0.846
PP1S137_96V6.1
Predicted protein (1399 aa)
   
 
  0.840
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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