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STRINGSTRING
PP1S31_88V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S31_88V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S31_88V6.1Predicted protein (375 aa)    
Predicted Functional Partners:
PP1S114_91V6.2
Predicted protein (390 aa)
     
   
  0.699
PP1S269_93V6.1
Predicted protein (471 aa)
     
   
  0.532
PP1S135_111V6.1
Predicted protein (720 aa)
       
 
  0.529
PP1S44_236V6.1
annotation not available (347 aa)
     
   
  0.528
PP1S16_36V6.1
annotation not available (348 aa)
     
   
  0.528
PP1S71_86V6.2
Predicted protein (358 aa)
           
  0.524
PP1S73_238V6.1
Predicted protein (352 aa)
           
  0.522
PP1S13_430V6.1
Predicted protein (255 aa)
           
  0.522
PP1S44_124V6.1
annotation not available (626 aa)
     
   
  0.520
PP1S22_92V6.1
annotation not available (353 aa)
           
  0.515
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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