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PP1S324_20V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S324_20V6.1" - 50S ribosomal protein L35 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S324_20V6.150S ribosomal protein L35 ; Belongs to the bacterial ribosomal protein bL35 family (126 aa)    
Predicted Functional Partners:
PP1S152_64V6.1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (113 aa)
   
 
  0.993
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
 
  0.992
PP1S47_241V6.1
Predicted protein (108 aa)
   
 
  0.992
PP1S36_299V6.1
Predicted protein (271 aa)
   
 
  0.992
PP1S77_21V6.1
Predicted protein (129 aa)
   
 
  0.992
PP1S229_21V6.1
Predicted protein (128 aa)
   
 
  0.992
PP1S1_793V6.3
annotation not available (291 aa)
   
 
  0.991
PP1S52_247V6.1
50S ribosomal protein L31 ; Belongs to the bacterial ribosomal protein bL31 family (209 aa)
   
 
  0.991
PP1S378_8V6.1
50S ribosomal protein L31 ; Belongs to the bacterial ribosomal protein bL31 family (137 aa)
   
 
  0.991
PP1S1_221V6.1
50S ribosomal protein L31 ; Belongs to the bacterial ribosomal protein bL31 family (152 aa)
   
 
  0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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