STRINGSTRING
PP1S324_20V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S324_20V6.1" - 50S ribosomal protein L35 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S324_20V6.150S ribosomal protein L35 (126 aa)    
Predicted Functional Partners:
PP1S152_64V6.1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (113 aa)
   
  0.995
rpl16
Ribosomal protein L16 (561 aa)
   
  0.993
PP1S358_49V6.1
Predicted protein (272 aa)
   
  0.979
PP1S21_61V6.1
Predicted protein (271 aa)
   
  0.979
PP1S46_69V6.1
Predicted protein (221 aa)
     
  0.978
PP1S204_118V6.3
Predicted protein (262 aa)
     
  0.978
PP1S141_43V6.1
Predicted protein (261 aa)
     
  0.978
PP1S80_110V6.1
Predicted protein (208 aa)
   
  0.978
PP1S75_223V6.1
Predicted protein (208 aa)
   
  0.978
PP1S63_162V6.1
Predicted protein (208 aa)
   
  0.978
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (23%) [HD]