STRINGSTRING
PP1S324_39V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S324_39V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S324_39V6.1Annotation not available (761 aa)    
Predicted Functional Partners:
PP1S225_68V6.1
Predicted protein (992 aa)
     
  0.972
PP1S357_53V6.1
Predicted protein (285 aa)
     
  0.956
PP1S161_12V6.1
Annotation not available (495 aa)
       
  0.913
PP1S13_170V6.1
Annotation not available (589 aa)
       
  0.913
PP1S114_181V6.1
Annotation not available (980 aa)
       
0.910
PP1S96_143V6.1
Predicted protein (338 aa)
     
  0.873
PP1S88_44V6.1
Predicted protein (354 aa)
     
  0.869
PP1S133_36V6.1
Predicted protein (358 aa)
     
  0.852
CHR1530
SNF2 family DNA-dependent ATPase (817 aa)
     
  0.850
PP1S293_34V6.1
Annotation not available (905 aa)
     
  0.850
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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