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ppabci17 protein (Physcomitrella patens) - STRING interaction network
"ppabci17" - ATP-binding cassette transporter, subfamily I, member 17, ABC component protein PpABCI17 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabci17ATP-binding cassette transporter, subfamily I, member 17, ABC component protein PpABCI17 (542 aa)    
Predicted Functional Partners:
ppabci8
ATP-binding cassette transporter, subfamily I, member 8, ABC component protein PpABCI8 (351 aa)
 
  0.985
ppabci18
annotation not available (260 aa)
 
 
  0.981
PP1S188_89V6.1
annotation not available (420 aa)
   
   
  0.777
PP1S185_74V6.1
Predicted protein (284 aa)
   
 
  0.745
ppabcf8
ATP-binding cassette transporter, subfamily F, member 8 protein PpABCF8 (768 aa)
   
   
  0.580
PP1S353_7V6.1
annotation not available (263 aa)
   
   
  0.580
ppabcf7
ATP-binding cassette transporter, subfamily F, member 7 protein PpABCF7 (773 aa)
   
   
  0.580
PP1S9_92V6.1
annotation not available (566 aa)
         
  0.578
PP1S455_2V6.1
Thioredoxin reductase ; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (573 aa)
         
  0.578
PP1S16_130V6.1
annotation not available (479 aa)
 
   
  0.562
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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