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STRINGSTRING
PP1S329_23V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S329_23V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S329_23V6.1Predicted protein (806 aa)    
Predicted Functional Partners:
PP1S126_27V6.1
Predicted protein (475 aa)
   
 
  0.973
PP1S70_202V6.1
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (374 aa)
           
  0.888
PP1S78_15V6.1
Predicted protein (210 aa)
       
      0.853
PP1S314_30V6.1
Predicted protein (210 aa)
       
      0.853
PP1S78_8V6.1
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family (389 aa)
           
  0.789
PP1S13_33V6.2
Predicted protein (790 aa)
     
   
  0.769
PP1S217_12V6.1
annotation not available (726 aa)
           
  0.757
PP1S258_47V6.1
Predicted protein (109 aa)
           
  0.751
PP1S21_256V6.1
annotation not available (443 aa)
   
   
  0.744
PP1S67_186V6.1
annotation not available (294 aa)
           
  0.708
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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