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STRINGSTRING
PP1S32_350V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S32_350V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S32_350V6.1Predicted protein; Belongs to the MT-A70-like family (430 aa)    
Predicted Functional Partners:
PP1S114_86V6.1
Predicted protein (741 aa)
     
   
  0.845
PP1S144_14V6.1
Predicted protein (735 aa)
     
   
  0.788
PP1S249_97V6.1
Predicted protein; Belongs to the MT-A70-like family (810 aa)
           
  0.780
PP1S7_251V6.1
Uncharacterized protein (659 aa)
           
  0.700
PP1S41_79V6.1
annotation not available (1962 aa)
           
  0.697
PP1S279_18V6.1
annotation not available (1495 aa)
           
  0.697
PP1S76_15V6.1
Predicted protein (397 aa)
           
  0.675
PP1S224_78V6.1
Predicted protein (546 aa)
           
  0.621
PP1S217_69V6.1
annotation not available (397 aa)
           
  0.621
PP1S281_19V6.1
Predicted protein (389 aa)
     
   
  0.619
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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