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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S335_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S335_14V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S335_14V6.1annotation not available (521 aa)    
Predicted Functional Partners:
PP1S101_82V6.1
Predicted protein (518 aa)
   
   
 
0.804
PP1S221_62V6.1
Predicted protein (506 aa)
   
   
 
0.803
PP1S1_67V6.1
annotation not available (517 aa)
         
  0.705
PP1S151_27V6.1
Predicted protein (576 aa)
   
 
  0.697
PP1S189_64V6.1
Predicted protein (449 aa)
         
  0.693
PP1S141_10V6.1
annotation not available (548 aa)
     
   
  0.691
PP1S66_284V6.1
Predicted protein (580 aa)
   
 
  0.682
PP1S30_37V6.1
Uncharacterized protein (226 aa)
   
   
  0.642
PP1S29_171V6.1
Predicted protein (546 aa)
   
   
  0.608
PP1S46_194V6.2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
   
  0.605
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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