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STRINGSTRING
PP1S335_74V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S335_74V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S335_74V6.1Predicted protein (652 aa)    
Predicted Functional Partners:
PP1S54_81V6.1
annotation not available (1991 aa)
     
   
  0.999
PP1S122_53V6.1
annotation not available (672 aa)
           
  0.928
PP1S209_60V6.1
Predicted protein (521 aa)
           
  0.927
TOP6B
DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family (692 aa)
     
   
  0.522
PP1S66_22V6.1
Predicted protein; Belongs to the glycosyltransferase 29 family (265 aa)
           
  0.521
PP1S457_24V6.1
annotation not available (427 aa)
           
  0.521
PP1S269_58V6.1
Predicted protein; Belongs to the glycosyltransferase 29 family (267 aa)
           
  0.521
PP1S258_38V6.1
annotation not available (166 aa)
           
  0.521
PP1S26_77V6.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (336 aa)
           
  0.507
PP1S41_172V6.1
Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis (207 aa)
           
  0.501
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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