• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S33_130V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S33_130V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S33_130V6.1annotation not available (1083 aa)    
Predicted Functional Partners:
PP1S307_2V6.2
Predicted protein (866 aa)
     
 
  0.905
PP1S236_41V6.1
annotation not available (632 aa)
     
 
  0.905
PP1S180_10V6.2
annotation not available (1012 aa)
           
  0.567
PP1S518_6V6.1
annotation not available (585 aa)
   
 
  0.561
PP1S234_59V6.1
annotation not available (633 aa)
   
 
  0.561
PP1S241_56V6.1
Predicted protein; Belongs to the CRISP family (235 aa)
           
  0.502
PP1S215_2V6.1
Predicted protein; Belongs to the CRISP family (179 aa)
           
  0.502
PP1S173_37V6.1
Uncharacterized protein; Belongs to the CRISP family (158 aa)
           
  0.502
PP1S230_38V6.1
annotation not available (717 aa)
     
   
  0.444
PP1S125_1V6.1
annotation not available (712 aa)
     
   
  0.444
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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