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STRINGSTRING
PP1S33_27V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S33_27V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S33_27V6.1Predicted protein (540 aa)    
Predicted Functional Partners:
PP1S37_36V6.1
Predicted protein (315 aa)
 
   
  0.900
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.604
COQ6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6 (485 aa)
   
 
  0.598
PP1S256_50V6.1
Predicted protein (708 aa)
   
 
  0.598
PP1S14_106V6.1
annotation not available (681 aa)
           
  0.522
PP1S226_17V6.1
Predicted protein (322 aa)
         
  0.511
PP1S98_5V6.1
Predicted protein (526 aa)
           
  0.499
PP1S45_76V6.2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (521 aa)
           
  0.467
PP1S28_304V6.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (570 aa)
           
  0.467
PP1S6_148V6.1
Predicted protein (313 aa)
           
  0.429
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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