STRINGSTRING
DRB1501 protein (Physcomitrella patens) - STRING interaction network
"DRB1501" - Double-stranded RNA binding protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRB1501Double-stranded RNA binding protein (441 aa)    
Predicted Functional Partners:
PpDCL1a
DsRNA-specific nuclease dicer and related ribonuclease (1866 aa)
       
 
  0.863
PP1S50_208V6.1
Annotation not available (765 aa)
       
 
  0.854
PP1S389_45V6.1
Annotation not available (810 aa)
       
 
  0.854
PP1S106_40V6.1
Annotation not available (654 aa)
       
 
  0.854
PP1S149_37V6.1
Predicted protein (1403 aa)
       
 
  0.848
PpAGO1b
Argonaute family member (1173 aa)
       
 
  0.711
PpAGO1a
Argonaute family member (1197 aa)
       
 
  0.711
PpAGO1c
Argonaute family member (1147 aa)
       
 
  0.711
PP1S283_7V6.1
Annotation not available (1021 aa)
       
 
  0.659
PP1S82_160V6.1
Annotation not available (1602 aa)
       
 
  0.659
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (9%) [HD]