STRINGSTRING
PP1S347_22V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S347_22V6.2" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S347_22V6.2Predicted protein (137 aa)    
Predicted Functional Partners:
PP1S74_39V6.1
Actin-interacting protein 1 (599 aa)
       
      0.874
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
       
      0.874
PP1S37_166V6.1
Predicted protein (183 aa)
       
      0.734
PP1S192_49V6.1
Annotation not available (67 aa)
       
      0.734
PP1S16_326V6.1
Annotation not available (194 aa)
       
      0.734
PP1S161_122V6.1
Predicted protein (164 aa)
       
      0.734
PP1S41_70V6.1
Predicted protein (185 aa)
       
 
  0.714
PP1S279_29V6.1
Annotation not available (181 aa)
       
 
  0.714
PP1S197_109V6.1
Annotation not available (474 aa)
       
 
  0.714
PP1S495_6V6.1
Predicted protein (817 aa)
       
      0.655
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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