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STRINGSTRING
PP1S349_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S349_14V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S349_14V6.1Predicted protein (699 aa)    
Predicted Functional Partners:
PP1S33_275V6.1
annotation not available (841 aa)
     
      0.861
PP1S191_3V6.1
Predicted protein (844 aa)
     
      0.861
PP1S32_143V6.1
Mannosyltransferase (610 aa)
           
  0.754
PP1S249_28V6.1
Predicted protein (342 aa)
           
  0.717
PP1S52_171V6.1
annotation not available (965 aa)
     
   
  0.698
PP1S275_81V6.1
Predicted protein; Belongs to the CGI121/TPRKB family (165 aa)
           
  0.698
PP1S86_217V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (504 aa)
     
   
  0.653
PP1S265_23V6.1
Predicted protein (254 aa)
     
   
  0.629
PP1S106_103V6.1
Predicted protein (446 aa)
           
  0.623
PP1S234_73V6.1
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (692 aa)
           
  0.613
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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